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Database Homepage

Sort database by: -- Please select one -- Gene title Gene symbol mRNA accession Protein accession Probeset ID IMCD Signal non-IMCD Signal IMCD:non-IMCD Ratio

This database of renal inner medullary collecting duct (IMCD) transcripts is based on Affymetrix array profiling carried out in the NHLBI Laboratory of Kidney and Electrolyte Metabolism (Uawithya et al, Physiol Genomics, 2008). Data are from IMCD cells freshly isolated from the renal medullas of rats. Use the menu bar above to sort the database by the different characteristics.

Signal intensities for IMCD samples and for samples representing non-IMCD elements of the inner medulla (non-IMCD) have been normalized such that the median value for IMCD is 1.0. Values are corrected for cross contamination of samples, i.e. non-IMCD elements on IMCD samples and vice versa.

These experimental data are derived from 3 pairs of Rat 230 2.0 Expression Array from Affymetrix, Inc. Standard error of the mean for all values can be obtained via the Download Data link in this page.

The IMCD Transcriptome Database was created by Panapat Uawithya, Brian Ruttenberg, Guozhong Ma, and Mark A. Knepper. Contact us with questions or comments.

* Annotation for this probe set is available as of November 13, 2007 (NetAffx Annotation Release 23, Rat 230_2 annotation revision 4, Affymetrix, Inc).